medcat.utils.ner.transformers_ner

Attributes

`_CITATION`
`_DESCRIPTION`

Classes

`MedCATAnnotationsConfig`	BuilderConfig for MedCATNER.
`TransformersDatasetNER`	MedCATNER: Output of MedCATtrainer

Module Contents

medcat.utils.ner.transformers_ner._CITATION = Multiline-String

Show Value

"""@misc{kraljevic2020multidomain,
      title={Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkit},
      author={Zeljko Kraljevic and Thomas Searle and Anthony Shek and Lukasz Roguski and Kawsar Noor and Daniel Bean and Aurelie Mascio and Leilei Zhu and Amos A Folarin and Angus Roberts and Rebecca Bendayan and Mark P Richardson and Robert Stewart and Anoop D Shah and Wai Keong Wong and Zina Ibrahim and James T Teo and Richard JB Dobson},
      year={2020},
      eprint={2010.01165},
      archivePrefix={arXiv},
      primaryClass={cs.CL}
}
"""

medcat.utils.ner.transformers_ner._DESCRIPTION = 'Takes as input a json export from medcattrainer.'

class medcat.utils.ner.transformers_ner.MedCATAnnotationsConfig

Bases: datasets.BuilderConfig

BuilderConfig for MedCATNER.

Parameters:: **kwargs – keyword arguments forwarded to super.

class medcat.utils.ner.transformers_ner.TransformersDatasetNER

Bases: datasets.GeneratorBasedBuilder

MedCATNER: Output of MedCATtrainer

BUILDER_CONFIGS

_info()

_split_generators(dl_manager): Returns SplitGenerators.

_generate_examples(filepaths)